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Ongoing projects

Alya performance benchmarkAlya performance benchmarkComputational fluid dynamics
Bolin Centre software management through local modules - trial evaluation.Set up and evaluate a local module system on Triolith for Bolin Centre software installations.Climate research
Comparative study of major ab initio software for materials scienceComparing major ab initio software for materials scienceComputational materials science
Essense Code OptimisationEssense Code Analysis and OptimisationComputational fluid dynamics
Computational science
Improved FFT and I/O for the Pencil codeEnabling support as part of the Prace DECI 8 programComputational astrophysics
Nek5000 BCBoundary conditions for Nek5000Computational fluid dynamics
Nek5000 OpenACCNek5000 with OpenACCComputational fluid dynamics
Nordic collaboration on e-infrastructures for Earth System ModelingNeIC climate and environment collaborative project.Climate research
Parallel FFTs in MolsimPerformance improvement of the SPME in MolsimComputational chemistry
Parallel Programming EducationTraining in parallel programmingComputational science
HPC training
Parallelization of a materials science codeParallelization request for a materials science codeComputational materials science
Computational science
PatchworkPatchwork: Bioinformatic tool for allele-specific copynumber analysis of tumor samplesBioinformatics
SNIC Emerging TechnologiesCoordinating new and emerging technologies within SNIC.Emerging technologies
SNIC Science CloudSNIC Science Cloud is a cloud computing infrastructure run by SNIC.Cloud computing
SNIC coordinated trainingSNIC coordinated trainingHPC training
SnicdocsA knowledgebase of user oriented information in Swedish academic high performance computing.
Test suite for VASPTest suite for VASPComputational materials science

Completed projects

BILS websearchBILS Web SearchSoftware development4 June 20124 February 2013
Computer-Aided Drug DesignAb-initio Electronic Structure Computation through LSDALTON CodeComputational chemistry
Computational science
1 November 201230 June 2014
Configuration of CAM5.3 nudged to ERA-Interim reanalysis and related post-processing softwareAssist researchers from Stockholm in configuring and launching the CAM5.3 global atmospheric model in a nudged configuration. Assist in installing post-processing software for converting CAM5.3 output to arl format suitable for imput into the HYSPLIT Lagrangian transport model.Climate research1 July 201630 November 2016
Dalton CPP-LR parallelizationParallelization of the coupled cluster complex polarization propagator module in the Dalton programComputational chemistry
Computational science
13 December 2012
Develop multi-category LIM3 sea-ice capabilities in EC-Earth 3Feature request to support multi-category sea-ice in the IFS component of EC-Earth 3.Climate research1 April 201331 August 2013
EC-Earth compilation and performance analysis: BeskowPort EC-Earth to Beskow and complete performance/scaling tests.Climate research16 November 201431 December 2014
EC-Earth/COSP code analysisComplete performance profiling of the EC-Earth model including the COSP satellite simulator.Climate research1 March 201731 March 2017
Enabling Xnavis for Massively Parallel Simulations of Wind FarmsParallel I/O Implementation and Communication Optimization on Xnavis Wind Farm Simulation CodeComputational fluid dynamics
Computational science
1 May 201331 October 2013
FidoEasy access to safe and reliable hosting and computation for Swedish bioinformatics.Bioinformatics20 May 201120 May 2014
HYPE Code ParallelisationPerformance Analysis and Parallelisation of SMHI's HYPE CodeComputational science
Climate research
1 December 201230 January 2013
Implementation of parallel NetCDF output and COSP in OpenIFSAssist researchers from Göteborg in including parallel NetCDF IO support and the COSP module in the OpenIFS modelClimate research1 June 201631 December 2016
Improving MPI communication latency on euroben kernelsImproving the MPI collective performance by network aware communicationComputational science1 July 201030 June 2012
Infrastructure for the European Network for Earth System modelling - Phase 2European network of distributed e-infrastructure to support Earth system modelling.Climate research1 April 201331 March 2017
Integration of OpenIFS into EC-Earth3Replace the atmospheric component of EC-Earth (IFS) with the OpenIFS model (c38r1).Climate research1 November 201431 May 2015
LES Code ParallelizationParallelization of a Large Eddy Simulation CodeComputational fluid dynamics1 March 201129 February 2012
MDR model library updateUpdating the automated classification system for MDR proteins based on new data.Bioinformatics1 January 201331 December 2013
MIMICA code analysisComplete performance profiling of the MISU MIT Cloud and Aerosol (MIMICA) LES model.Climate research1 January 201731 May 2017
NSC GPU and Accelerator PilotGPU/Accelerator Pilot Project at NSCComputational science1 April 201231 December 2012
NorESM code analysisComplete performance profiling of the Norwegian Earth System Model (NorESM) on Triolith.Climate research1 October 201431 December 2014
Optimization of a lagrangian cloud parcel model for use in the global climate model ECHAM6.1-HAM2.2Serial optimization of a cloud parcel model for embedding in a the ECHAM-HAM global climate model.Climate research1 April 201531 May 2015
PRACE WP12: Network topology analysis and efficient collective designNetwork topology analysis and efficient collective design andComputational science1 September 201131 August 2013
Parallel I/O Implementation on the Multiple Sequence Alignment Software ClustalW-MPIParallel I/O Implementation on the Multiple Sequence Alignment Software ClustalW-MPIBioinformatics
Computational science
1 August 201231 May 2013
PconsC for FidoWeb hosting for PconsCBioinformatics7 September 201310 March 2014
Performance Analysis of ad OSS ProgramPerformance Analysis of ad_OSS Program for Modeling Water MoleculesComputational chemistry
Computational science
1 May 201231 May 2012
Performance Benchmark of NEMO Oceanography CodeApplication Benchmark of NEMO Oceanography Code on CURIE Tier-0 SystemComputational science
Climate research
1 July 201230 June 2013
Petascaling enabling and support for EC-EARTH3Petascaling of high resolution EC-EARTH on PRACE Tier-0 Curie SystemComputational science1 July 201030 June 2012
Portability performance analysis and improvement of ESMPorting and performance analysis of earth system models (ESM) on different architecturesComputational science1 September 2009
Porting Earth system models to triolithPort three commonly used Earth system models to triolith.Climate research1 February 201331 March 2013
Synthetic Benchmark on CurieSynthetic Benchmark for PRACE Tier-0 Curie SystemComputational science1 July 201030 June 2012
Technical development of the EC-Earth3 Single Column Model (SCM)Configure a coupled, single column model version of EC-Earth3 (OpenIFS, oasis3-mct, nemo3.6)Climate research1 October 201531 May 2016