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List of results

• Configuration of CAM5.3 nudged to ERA-Interim reanalysis and related post-processing software  + (Assist researchers from Stockholm in confi … Assist researchers from Stockholm in configuring and launching the CAM5.3 global atmospheric model in a nudged configuration. Assist in installing post-processing software for converting CAM5.3 output to arl format suitable for imput into the HYSPLIT Lagrangian transport model.to the HYSPLIT Lagrangian transport model.)
• Awk workshop (UPPMAX, August 2022)  + (Awk Workshop)
• Awk workshop training material  + (Awk workshop training material - online)
• BEDTools  + (BEDTools is a software suite for the comparison, manipulation and annotation of genomic features in Browser Extensible Data (BED) and General Feature Format (GFF) format)
• BILS websearch  + (BILS Web Search)
• Basic Singularity workshop (UPPMAX/HPC2N, September 28)  + (Basic Singularity workshop)
• Basic Singularity workshop material  + (Basic Singularity workshop material - online)
• FreeBayes  + (Bayesian SNP and short indel caller from the Marth lab (who created Mosaik).)
• MrBayes  + (Bayesian estimation of phylogeny)
• Nek5000 BC  + (Boundary conditions for Nek5000)
• Bowtie  + (Bowtie is an ultrafast, memory-efficient short read aligner.)
• CodeRefinery Scientific Programming Gettogether (May 2017)  + (Building a Nordic community of research software developers)
• MUSIC  + (C++ library for interprocess communication in large scale neuronal network simulations)
• C3SE storage  + (C3SE Swestore storage node of 400Tb)
• Triolith  + (Capability cluster with 338 TFLOPS peak and 1:2 Infiniband fat-tree)
• Cluster architecture and job submission (Lunarc, February 2018)  + (Cluster architecture and job submission)
• Editing Cluster architecture and job submission, February 2022  + (Cluster architecture and job submission)
• Cluster architecture and job submission (Lunarc, October 2017)  + (Cluster architecture and job submission)
• Cluster architecture and job submission, February 2021  + (Cluster architecture and job submission)
• Cluster architecture and job submission (Lunarc, May 2017)  + (Cluster architecture and job submission)
• Cluster architecture and job submission (Lunarc, October 2019)  + (Cluster architecture and job submission)
• Cluster architecture and job submission (Lunarc, February 2019)  + (Cluster architecture and job submission)
• Cluster architecture and job submission (Lunarc, October 2018)  + (Cluster architecture and job submission)
• Cluster architecture and job submission, September 2022  + (Cluster architecture and job submission)
• CodeRefinery Workshop (Lund, May 2018)  + (CodeRefinery Workshop)

• Comsol  + (Commercial Mulitphysics Similation software)

• Comparative study of major ab initio software for materials science  + (Comparing major ab initio software for materials science)
• EC-Earth/COSP code analysis  + (Complete performance profiling of the EC-Earth model including the COSP satellite simulator.)
• MIMICA code analysis  + (Complete performance profiling of the MISU MIT Cloud and Aerosol (MIMICA) LES model.)
• NorESM code analysis  + (Complete performance profiling of the Norwegian Earth System Model (NorESM) on Triolith.)
• Computational Chemistry - Enhanced Sampling MD Course at HPC2N (Ume, February 2018)  + (Computational Chemistry - Enhanced Sampling MD Course at HPC2N in Umeå)
• MD Course at HPC2N, Umeå, June 2016  + (Computational Chemistry - MD Simulations in Umeå)
• MD/CHARMM course at HPC2N (4 May 2017)  + (Computational Chemistry - MD/CHARMM course in Umeå)
• Technical development of the EC-Earth3 Single Column Model (SCM)  + (Configure a coupled, single column model version of EC-Earth3 (OpenIFS, oasis3-mct, nemo3.6))
• BclConverter  + (Converts bcl files to Qseq files.)
• SNIC Emerging Technologies  + (Coordinating new and emerging technologies within SNIC.)
• Computational Chemistry Course - MD Simulations, HPC2N, 20 November 2017  + (Course: Computational Chemistry - MD Simulations (NAMD))
• Introducton to OpenMP/MPI, HPC2N, 26 March 2018  + (Course: Introduction to OpenMP and MPI at HPC2N in Umeå)
• Lindgren  + (Cray XE6 capability cluster with 305 TFLOPS peak performance)
• Quantum Espresso  + (DFT based electronic structure modeling codes)
• WIEN2k  + (DFT program package based on the full-potential (linearized) augmented plane wave + local orbitals method)
• Data management seminar (UPPMAX, March 2016)  + (Data management)
• Data Management Seminar Online  + (Data management seminar recording)
• DDT  + (Debugger)
• DDT (PDC September 2014)  + (Debugging applications using DDT)
• Debugging of HPC applications, September 2019  + (Debugging of HPC applications)
• ENCCS/PDC VeloxChem Workshop: Quantum Chemistry Towards Pre-exascale and Beyond (March 2022)  + (ENCCS/PDC VeloxChem Workshop: Quantum Chemistry Towards Pre-exascale and Beyond)
• ENCCS/PDC VeloxChem Workshop: Quantum Chemistry from Laptop to HPC (May 2021)  + (ENCCS/PDC VeloxChem Workshop: Quantum Chemistry from Laptop to HPC)
• Fido  + (Easy access to safe and reliable hosting and computation for Swedish bioinformatics.)
• Course: Efficient MD simulations at HPC2N (February 2019)  + (Efficient MD simulations at HPC2N)
• Course: Efficient MD simulations at HPC2N (February 2020)  + (Efficient MD simulations at HPC2N)