Welcome to the SNIC knowledge base and documentations site.
NOTE: This site is under constant development and is still in the early days of it's existence!
The aim of this site is that you should be able to get information, help, tips-and-tricks, etc. regarding the most widely used computational tools.
We also have an application-support e-mail address:
This mail address can be used if you have support questions that are not directly regarding how to run a given application on a specific SNIC HPC resource, but regarding how to use the application itself or how to solve an issue with the application that is not specific to running it on a certain resource.
The application-support queue is monitored by all the application experts, who are distributed over all the six SNIC HPC centers, so there is a good chance that someone who knows the given application will see the support request and help answering your questions or solve your issue.
If you don’t know whether or not to use the application-support address for your support request, then just send your request to the support address at the HPC center where you run your jobs. Then someone monitoring that support queue will then in turn move your support request to the application-support queue if they find that your request is better handled there.
- 1 Application Experts
- 2 System Experts
- 3 Scientific Topics
- 3.1 Computational Chemistry
- 3.2 Computational Physics
- 3.3 Bioinformatics
- 3.4 Meteorology and Climatology
- 3.5 Visualization and post-processing
- 3.6 Software Development
- 4 Grid information (SweGrid/Swestore)
- 5 Using This Wiki
- Rossen Apostolov, PDC
- Lilit Axner, PDC
- Chandan Basu, NSC
- Mattias Chevalier, PDC
- Michael Djurfeldt, PDC
- Torgny Faxén, NSC
- Anders Hast, Uppmax
- Joel Hedlund, NSC, Bioinformatics
- Joachim Hein, Lunarc
- Jonas Lindemann, Lunarc
- Johan Raber, NSC, Computational Chemistry
- Torben Rasmussen, NSC, Computational Chemistry
- Åke Sandgren, HPC2N
- Mattias Slabanja, C3SE
- Ola Spjuth, Uppmax
- Daniel Spångberg, Uppmax
- Olav Vahtras, PDC
- Jonathan Vincent, PDC
- Molecular Dynamics
- Monte Carlo Thermodynamics
- Edge - Edge is an unstructured CFD solver developed at the Swedish Defence Research Agency.
- Simson - Simson is a software package that implements an efficient spectral integration technique to solve the Navier-Stokes equations for incompressible channel and boundary layer flows.
Bioinformatics is the science of handling information in biology. See also the Bioinformatics category page.
- Sequence analysis
- Computational evolutionary biology
- Molecular Modeling
- MUSIC - C++ library implementing an API which allows large scale neuronal network simulators to exchange data during runtime.
Meteorology and Climatology
Visualization and post-processing
- Compilers and Libraries
- Intel, PGI, GNU Compilers
- Profiling and Debugging
- Intel trace analyzer
Grid information (SweGrid/Swestore)
Using This Wiki
Please do not upload or otherwise publish copyrighted material on this wiki.