Difference between revisions of "Main Page"
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=[[Application Experts]]= | =[[Application Experts]]= | ||
| − | *Rossen Apostolov, PDC | + | *[http://dhcp-221-37.pdc.kth.se/drupal/node/11 Rossen Apostolov, PDC] |
| − | *Lilit Axner, PDC | + | *[http://dhcp-221-37.pdc.kth.se/drupal/node/19 Lilit Axner, PDC] |
*[[Application_Experts#Chandan Basu, NSC|Chandan Basu, NSC]] | *[[Application_Experts#Chandan Basu, NSC|Chandan Basu, NSC]] | ||
| − | *Mattias Chevalier, PDC | + | *[http://dhcp-221-37.pdc.kth.se/drupal/node/21 Mattias Chevalier, PDC] |
| − | *Michael Djurfeldt, PDC | + | *[http://dhcp-221-37.pdc.kth.se/drupal/node/23 Michael Djurfeldt, PDC] |
*Torgny Faxén, NSC | *Torgny Faxén, NSC | ||
*Anders Hast, Uppmax | *Anders Hast, Uppmax | ||
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*Ola Spjuth, Uppmax | *Ola Spjuth, Uppmax | ||
*Daniel Spångberg, Uppmax | *Daniel Spångberg, Uppmax | ||
| − | *Olav Vahtras, PDC | + | *[http://dhcp-221-37.pdc.kth.se/drupal/node/24 Olav Vahtras, PDC] |
*[[Application_Experts#Jonathan Vincent, PDC|Jonathan Vincent, PDC]] | *[[Application_Experts#Jonathan Vincent, PDC|Jonathan Vincent, PDC]] | ||
Revision as of 09:31, 2 March 2011
Welcome to the SNIC knowledge base and documentations site.
NOTE: This site is under constant development and is still in the early days of it's existence!
The aim of this site is that you should be able to get information, help, tips-and-tricks, etc. regarding the most widely used computational tools.
Contents
Application Experts
- Rossen Apostolov, PDC
- Lilit Axner, PDC
- Chandan Basu, NSC
- Mattias Chevalier, PDC
- Michael Djurfeldt, PDC
- Torgny Faxén, NSC
- Anders Hast, Uppmax
- Joel Hedlund, NSC, Bioinformatics
- Joachim Hein, Lunarc
- Jonas Lindemann, Lunarc
- Johan Raber, NSC
- Torben Rasmussen, NSC, Computational Chemistry
- Åke Sandgren, HPC2N
- Mattias Slabanja, C3SE
- Ola Spjuth, Uppmax
- Daniel Spångberg, Uppmax
- Olav Vahtras, PDC
- Jonathan Vincent, PDC
System Experts
Scientific Topics
Computational Chemistry
Prominent Software
- Molecular Dynamics
- GROMACS
- Namd
- Amber
- Monte Carlo Thermodynamics
- QSAR
Computational Physics
Prominent Software
Condensed Matter
- VASP
Astrophysics
Bioinformatics
Bioinformatics is the science of handling information in biology. See also the Bioinformatics category page.
Prominent software
- Sequence analysis
- BLAST, FASTA - sequence similarity search and pairwise local alignment.
- HMMER - pattern recognition for protein families or domains.
- Multiple sequence alignment - simultaneous alignment of multiple biological sequences.
- Computational evolutionary biology
- Molecular Modeling
- GROMACS - molecular dynamics, Newtonian simulation of motion.
Meteorology and Climatology
- ECEARTH
- RCA
- RCO
- NEMO
Visualization and post-processing
- Grace
- Gnuplot
Software Development
- Compilers and Libraries
- Intel, PGI, GNU Compilers
- MPI
- BLAS
- MKL
- Profiling and Debugging
- TotalView
- Vampir
- Valgrind
- Intel trace analyzer
Grid information (SweGrid/Swestore)
SweGrid User's Guide
Swestore
Using This Wiki
Consult the User's Guide for information on using the wiki software. For formatting and mediawiki markup details see Formatting. For adding links see Links. Also have a look at the MediaWiki FAQ.
Please do not upload or otherwise publish copyrighted material on this wiki.
